The detailed information of tRNA gene sequence


Sequence ID>W1610011005
Genome IDAMPO01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium formicicum DSM 3637 [AMPO]
Start position on genome 87502
End posion on genome 87431
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatctaatgc
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGGGAGTTCAAATC
TCTCCCTTGGCTtta
Downstream region at tRNA end position 
aatcatttaa
Secondary structure (Cloverleaf model)
>W1610011005	Cys	GCA
                   c      Ttta aatcatttaa
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
        G A        A      | + | | |     A
      A     T T C G       G G G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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