The detailed information of tRNA gene sequence


Sequence ID>W1610011041
Genome IDAMSE01000002
Search identical group
Phylum/ClassUnclassified
SpeciesMethanomethylophilus alvi alvus Mx1201 [AMSE]
Start position on genome 37158
End posion on genome 37243
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggctcgtgct
tRNA gene sequence 
GCGGGAGTGGCTCAGTGGACTACTACGCCGGTCTTGAAAACCGGTGGGATCATCCCTCGG
GGGTTCGAATCCCTCCTCCCGCGCCA
Downstream region at tRNA end position 
tcccgttttt
Secondary structure (Cloverleaf model)
>W1610011041	Ser	TGA
                   t      GCCA tcccgttttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       C T C G       G G G G G     C
    G             |                 T T
    A       C T A C
      C T A        G     TGGGATCATCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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