The detailed information of tRNA gene sequence


Sequence ID>W1610012257
Genome IDAOIE01000079
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNatrinema pellirubrum DSM 15624 [AOIE]
Start position on genome 47099
End posion on genome 47184
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaccgacggT
tRNA gene sequence 
GTTGTGGTAGCCAAGCGGCCCAAGGCGCATGGTTGCTAACCATGTGGCGTCAAGCCTCCG
GGGTTCGAATCCCCGCCACAACGTCg
Downstream region at tRNA end position 
gaactcagct
Secondary structure (Cloverleaf model)
>W1610012257	Ser	GCT
                   T      GTCg gaactcagct
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    G       A C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TGGCGTCAAGCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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