The detailed information of tRNA gene sequence


Sequence ID>W1610012628
Genome IDAOIQ01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax asiaticus JCM 14624 [AOIQ]
Start position on genome 450237
End posion on genome 450163
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
agcatgagtc
tRNA gene sequence 
AGCGGGATGGGATAGCCAGGAGATTCCGGCGGGCTCATAACCCGCAGATCGGTAGTTCAA
ATCTACCTCCCGCTAtgt
Downstream region at tRNA end position 
tttgtcgcga
Secondary structure (Cloverleaf model)
>W1610012628	Pseudo	CAT
                   c      Atgt tttgtcgcga
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A T C     A
    C C G A        G      | | | | |     A
  A         T A G G       G G T A G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGATC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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