The detailed information of tRNA gene sequence


Sequence ID>W1610012640
Genome IDAOIQ01000014
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax asiaticus JCM 14624 [AOIQ]
Start position on genome 269982
End posion on genome 269909
Amino Acid Pseudo
Anticodon CTG
Upstream region at tRNA start position 
ggctgtgtac
tRNA gene sequence 
AGTCCATTAGGGTAGCGGCCAATCCTTCGAGCTTCTGGGGCTCGAGACCCTGGTTCGAAT
CCAGGATGGACTACtt
Downstream region at tRNA end position 
ctccgtctat
Secondary structure (Cloverleaf model)
>W1610012640	Pseudo	CTG
                   c      ACtt ctccgtctat
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    G       T G G G       C C T G G     C
    G         | | +                 T T
    C       T C C T
      C A A        T     AGAC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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