The detailed information of tRNA gene sequence


Sequence ID>W1610012787
Genome IDAOIT01000039
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNatrinema limicola JCM 13563 [AOIT]
Start position on genome 8806
End posion on genome 8891
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaccgaccgT
tRNA gene sequence 
GTTGTGGTAGCCAAGCGGCCCAAGGCGCATGGTTGCTAACCATGTGGCGTCAAGCCTCCG
GGGTTCGAATCCCCGCCACAACGTCg
Downstream region at tRNA end position 
gaaccttcgc
Secondary structure (Cloverleaf model)
>W1610012787	Ser	GCT
                   T      GTCg gaaccttcgc
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    G       A C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TGGCGTCAAGCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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