The detailed information of tRNA gene sequence


Sequence ID>W1610012833
Genome IDAOIU01000036
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalosimplex carlsbadense 2002/9/1 [AOIU]
Start position on genome 116436
End posion on genome 116361
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
caccgaacgc
tRNA gene sequence 
GCCGGTGTAGCTCAGACTGGCTAGAGCGAATCCTTCGTAAGGATTAGGCCGAGGGTTCAA
ATCCCTCCACCGGCTCtt
Downstream region at tRNA end position 
tccttcggaa
Secondary structure (Cloverleaf model)
>W1610012833	Thr	CGT
                   c      TCtt tccttcggaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C A G A        A      | | | | |     A
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGCC
                    A - T
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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