The detailed information of tRNA gene sequence


Sequence ID>W1610012838
Genome IDAOIV01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 103449
End posion on genome 103532
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acgggtcgct
tRNA gene sequence 
GGTGGGATGGCAGAGTGGACTATTGCGCCGGTCTTGAAAACCGGTGGCCTTCGGCCTCCT
GGGTTCGAATCCCAGTCCCACCGCgt
Downstream region at tRNA end position 
tctgacgtac
Secondary structure (Cloverleaf model)
>W1610012838	Ser	TGA
                   t      GCgt tctgacgtac
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    A       T T G C
      C T A        G     TGGCCTTCGGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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