The detailed information of tRNA gene sequence


Sequence ID>W1610012850
Genome IDAOIV01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 135233
End posion on genome 135306
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gtgttttcga
tRNA gene sequence 
GGGCCGGTAGCTCAGTTTGGCAGAGCGTCTGGCTTTTAACCAGACGGTCGGGGGTTCAAG
TCCCTCCCGGCCCGttt
Downstream region at tRNA end position 
tgagacccgc
Secondary structure (Cloverleaf model)
>W1610012850	Lys	TTT
                   a      Gttt tgagacccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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