The detailed information of tRNA gene sequence


Sequence ID>W1610012861
Genome IDAOIV01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 226
End posion on genome 301
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acgaaaccgc
tRNA gene sequence 
GCCAAGGTGGCAGAGTTCGGCCTAACGCGTTCGCCTGCAGAGCGAATCTCCGCCGGTTCA
AATCCGGCCCTTGGCTtac
Downstream region at tRNA end position 
actcctcgac
Secondary structure (Cloverleaf model)
>W1610012861	Cys	GCA
                   c      Ttac actcctcgac
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    T T G A        G      | | | | |     A
  C         G A C G       G C C G G     C
  G             | |                 T T
  G         A C G C
    C C T A        G     TCTCC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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