The detailed information of tRNA gene sequence


Sequence ID>W1610012864
Genome IDAOIV01000025
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 59684
End posion on genome 59612
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggtagatgc
tRNA gene sequence 
GGGACCGTGGGTTAGCCTGGTATACTTCGGGCCTTGGGTGCCCGTGACCCCGGTTCGAAT
CCGGGCGGTCCCAttt
Downstream region at tRNA end position 
ctgtgcgacg
Secondary structure (Cloverleaf model)
>W1610012864	Pro	TGG
                   c      Attt ctgtgcgacg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    C       T T G G       C C C G G     C
    T         | | +                 T T
    G       T A C T
      G T A        T     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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