The detailed information of tRNA gene sequence


Sequence ID>W1610012883
Genome IDAOIV01000045
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogeometricum pallidum JCM 14848 [AOIV]
Start position on genome 222271
End posion on genome 222344
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agccccgatg
tRNA gene sequence 
GGGCGTGTGGCCTAGCGGATCAGGGCGAGGGGTTCCTAACCCCTCGATCGCGGGTTCGAA
TCCCGCCACGCCCGtta
Downstream region at tRNA end position 
tcgggtcgag
Secondary structure (Cloverleaf model)
>W1610012883	Arg	CCT
                   g      Gtta tcgggtcgag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    A       G G G C
      T C A        G     CGATC
                    A - T
                    G - C
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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