The detailed information of tRNA gene sequence


Sequence ID>W1610013030
Genome IDAOJF01000032
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum litoreum JCM 13561 [AOJF]
Start position on genome 10797
End posion on genome 10882
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtcgaagcga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGGTAGATTCGAAATCTACTGTCCATTCGGACAC
CGGAGTTCAAATCTCCGCCTCGGCGCtc
Downstream region at tRNA end position 
ctctcaattt
Secondary structure (Cloverleaf model)
>W1610013030	Ser	CGA
                   a      GCtc ctctcaattt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       C G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCATTCGGACAC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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