The detailed information of tRNA gene sequence


Sequence ID>W1610013160
Genome IDAOJI01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum aidingense JCM 13560 [AOJI]
Start position on genome 405253
End posion on genome 405167
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagtccacc
tRNA gene sequence 
GGTGGGATGACAGAGTGGACGAACGTGCCTGCCTGGAAAGCAGGTGGCTGAAAGGCCTCG
TCGGTTCGAATCCCACTCCCACCGCCT
Downstream region at tRNA end position 
ccgaggcgcc
Secondary structure (Cloverleaf model)
>W1610013160	Ser	GGA
                   c      GCCT ccgaggcgcc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | |   | |     G
    G       G A C A       G T C G G     C
    G           | |                 T T
    A       A C G T
      C G A        G     TGGCTGAAAGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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