The detailed information of tRNA gene sequence


Sequence ID>W1610013162
Genome IDAOJI01000022
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum aidingense JCM 13560 [AOJI]
Start position on genome 232412
End posion on genome 232337
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgacacgagc
tRNA gene sequence 
GGGTTGGTGGTCTAGCCAGGTTATGACGGCTCCTTCACACGGAGCAGGTCGGCGGTTCGA
ATCCGCCCCAACCCACtt
Downstream region at tRNA end position 
ctggcggcac
Secondary structure (Cloverleaf model)
>W1610013162	Val	CAC
                   c      ACtt ctggcggcac
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G C C     A
    C C G A        G      | | | | |     G
  A         T C T G       G G C G G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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