The detailed information of tRNA gene sequence


Sequence ID>W1610013173
Genome IDAOJI01000026
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum aidingense JCM 13560 [AOJI]
Start position on genome 24666
End posion on genome 24595
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggagttacgc
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGACCCCGGGTTCAAATC
CCGGCCTAGGCTttc
Downstream region at tRNA end position 
tgcgcgtctc
Secondary structure (Cloverleaf model)
>W1610013173	Thr	GGT
                   c      Tttc tgcgcgtctc
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     T T C G       C C G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGACC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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