The detailed information of tRNA gene sequence


Sequence ID>W1610013186
Genome IDAOJI01000033
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum aidingense JCM 13560 [AOJI]
Start position on genome 12028
End posion on genome 12100
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tttcgggtgc
tRNA gene sequence 
GGGCTCGTAGATCAGCGGCAGATCGCTTCCTTCGCAAGGAAGAGGCCCGGGGTTCAAATC
CCCGCGAGTCCACtc
Downstream region at tRNA end position 
acttcgttcg
Secondary structure (Cloverleaf model)
>W1610013186	Ala	CGC
                   c      ACtc acttcgttcg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      C     C T A G       C G G G G     C
      G     | | | |                 T T
      G     G A T C
        C A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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