The detailed information of tRNA gene sequence


Sequence ID>W1610013238
Genome IDAOJK01000008
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 35503
End posion on genome 35576
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aagcatgcgt
tRNA gene sequence 
GCCGGGGTAGCTCAGCTGGCAGAGCGATTCCTTCGTAAGGAATAGGTCGAGGGTTCAAAT
CCCTCCTCCGGCTCtt
Downstream region at tRNA end position 
ttgacggaac
Secondary structure (Cloverleaf model)
>W1610013238	Thr	CGT
                   t      TCtt ttgacggaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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