The detailed information of tRNA gene sequence


Sequence ID>W1610013244
Genome IDAOJK01000023
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 15757
End posion on genome 15832
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgttgattgc
tRNA gene sequence 
GCTCTGGTGGTGTAGTCCGGCCAATCATATCACCCTCTCACGGTGATGACCTGGGTTCGA
ATCCCAGCCGGAGCACtc
Downstream region at tRNA end position 
ctctttccgt
Secondary structure (Cloverleaf model)
>W1610013244	Glu	CTC
                   c      ACtc ctctttccgt
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C T G A        G      | | | | |     G
  C         T G T G       C T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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