The detailed information of tRNA gene sequence


Sequence ID>W1610013246
Genome IDAOJK01000024
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 41378
End posion on genome 41307
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctgattgcgc
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGACCCCGAGTTCAAATC
TCGGCCTAGGCTtcg
Downstream region at tRNA end position 
accttttcgt
Secondary structure (Cloverleaf model)
>W1610013246	Thr	GGT
                   c      Ttcg accttttcgt
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     G - C          T A
                    T     G G C T C     A
        G A        A      | | | | |     A
      C     T T C G       C C G A G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGACC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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