The detailed information of tRNA gene sequence


Sequence ID>W1610013252
Genome IDAOJK01000035
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 6697
End posion on genome 6621
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgctcacct
tRNA gene sequence 
GGGCCAATAGCTCAGTCAGGTTGAGCGCTCGGCTGATAACCGGGAGGTCCACGGTTCAAA
TCCGTGTTGGCCCACCT
Downstream region at tRNA end position 
taattcaact
Secondary structure (Cloverleaf model)
>W1610013252	Ile	GAT
                   t      ACCT taattcaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G T G C C     A
      T G A        A      | | | | |     A
    C       C T C G       C A C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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