The detailed information of tRNA gene sequence


Sequence ID>W1610013256
Genome IDAOJK01000040
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 23916
End posion on genome 23832
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aacaccgcga
tRNA gene sequence 
GCGTGGGTAGCCAAGCCAGGCCAACGGCGCAGCGTTGAGGGCGCTGTCCTGTAGAGGTCC
GCCGGTTCAAATCCGGTCCCACGCAtat
Downstream region at tRNA end position 
ccgaaccact
Secondary structure (Cloverleaf model)
>W1610013256	Leu	GAG
                   a      Atat ccgaaccact
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
    C C G A        A      + | | | |     A
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCTGTAGAGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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