The detailed information of tRNA gene sequence


Sequence ID>W1610013271
Genome IDAOJK01000064
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 108318
End posion on genome 108390
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
atcgtgatga
tRNA gene sequence 
GGGCTCGTAGATCAGTGGCAGATCGCTTCCTTCGCAAGGAAGAGGCCCGGGGTTCAAATC
CCCGCGAGTCCACtt
Downstream region at tRNA end position 
cttcgctcac
Secondary structure (Cloverleaf model)
>W1610013271	Ala	CGC
                   a      ACtt cttcgctcac
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      T     C T A G       C G G G G     C
      G     | | | |                 T T
      G     G A T C
        C A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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