The detailed information of tRNA gene sequence


Sequence ID>W1610013274
Genome IDAOJK01000072
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 89142
End posion on genome 89057
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtgacgtgT
tRNA gene sequence 
GGTGGGATGGCAGAGTGGCCCATTGCGCCTGCCTTGAAAGCAGGTAGCCTCACGGCTTCC
TGGGTTCGAATCCCAGTCCCACCGTag
Downstream region at tRNA end position 
gcgcgcggcg
Secondary structure (Cloverleaf model)
>W1610013274	Ser	TGA
                   T      GTag gcgcgcggcg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C C A        G     TAGCCTCACGGCTTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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