The detailed information of tRNA gene sequence


Sequence ID>W1610013277
Genome IDAOJK01000077
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum californiense DSM 19288 [AOJK]
Start position on genome 8479
End posion on genome 8404
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aagcccctgc
tRNA gene sequence 
GGGTTGGTAGTCTAGTCCGGTTATGACACCTCCTTGACATGGAGGAGGCCGGCGGTTCAA
ATCCGCCCCAACCCACtc
Downstream region at tRNA end position 
gcgctacgcg
Secondary structure (Cloverleaf model)
>W1610013277	Val	GAC
                   c      ACtc gcgctacgcg
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G C C     A
    C T G A        A      | | | | |     A
  C         T C T G       G G C G G     C
  G           | | |                 T T
  G         T G A C
    T T A          A     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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