The detailed information of tRNA gene sequence


Sequence ID>W1610013439
Genome IDAOJO01000047
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum hochstenium ATCC 700873 [AOJO]
Start position on genome 40765
End posion on genome 40693
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gcggtcgtga
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGACAGAGCACTTGGTTCCGGACCAAGATGCCGCGGGTTCAAAT
CCCGTCGCGCCCGtgt
Downstream region at tRNA end position 
tctcgcgtcg
Secondary structure (Cloverleaf model)
>W1610013439	Arg	CCG
                   a      Gtgt tctcgcgtcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     A
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     ATGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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