The detailed information of tRNA gene sequence


Sequence ID>W1610013485
Genome IDAOLD01000043
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax sp. ATCC BAA-646 [AOLD]
Start position on genome 50974
End posion on genome 50890
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gggagagtgc
tRNA gene sequence 
GCGGGGGTGGCTGAGCCAGGCCAAAAGCGGCGGACTTAAGATCCGCTCCCGTAGGGGTTC
GCGAGTTCGAATCTCGTCCCCCGCAttt
Downstream region at tRNA end position 
tcgtcgccga
Secondary structure (Cloverleaf model)
>W1610013485	Leu	TAA
                   c      Attt tcgtcgccga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C T C     A
    C C G A        G      + | | | |     G
  A         G T C G       G C G A G     C
  G           | | |                 T T
  G         A A G C
    C C A A        G     TCCCGTAGGGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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