The detailed information of tRNA gene sequence


Sequence ID>W1610014008
Genome IDAOLO01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 [AOLO]
Start position on genome 73002
End posion on genome 73084
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
accctatcga
tRNA gene sequence 
GCGCGGGTAGCCAAGTGGCCAAAGGCGCAGCGCTTAGGACGCTGTGGTGTAGACCTTCGC
AGGTTCGAACCCTGTCCCGCGCAttt
Downstream region at tRNA end position 
tctgtccgag
Secondary structure (Cloverleaf model)
>W1610014008	Leu	TAG
                   a      Attt tctgtccgag
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          C A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    G       A C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      C A A        G     TGGTGTAGACCTTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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