The detailed information of tRNA gene sequence


Sequence ID>W1610014016
Genome IDAOLO01000007
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 [AOLO]
Start position on genome 441555
End posion on genome 441628
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attggaatac
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGTTATGACGCGGCCTTTACAAGGCTGAGGTCGGTGGTTCGAA
TCCGCCCGAGCCCAtgt
Downstream region at tRNA end position 
ttctgcgacg
Secondary structure (Cloverleaf model)
>W1610014016	Val	TAC
                   c      Atgt ttctgcgacg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | + | |     G
    T       T C T G       G G T G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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