The detailed information of tRNA gene sequence


Sequence ID>W1610014105
Genome IDAOLQ01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula vallismortis ATCC 29715 [AOLQ]
Start position on genome 254358
End posion on genome 254447
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
ccactgtaca
tRNA gene sequence 
GGTGGCTCAAACCCTACCGGTGAGGGGACCGGTCTTGAAAACCGGTGAGCACTGCGTCTC
TTGTCGGTTCGAGTCCGACAGCCACCGCTA
Downstream region at tRNA end position 
aacaacgatc
Secondary structure (Cloverleaf model)
>W1610014105	Pseudo	TGA
                   a      GCTA aacaacgatc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A          T G
                    C     C A G C C     A
    C A T C        A      | | | | |     G
  C         C C A A       G T C G G     C
  G         | |                     T T
  G         G G G G
    T G A          A     TGAGCACTGCGTCTCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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