The detailed information of tRNA gene sequence


Sequence ID>W1610014115
Genome IDAOLQ01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula vallismortis ATCC 29715 [AOLQ]
Start position on genome 256393
End posion on genome 256477
Amino Acid Pseudo
Anticodon TAA
Upstream region at tRNA start position 
gggttttctc
tRNA gene sequence 
AGGGGCTTGTCCGAGTCTGGCCGAAGGAGATGGACTTAAGATCCATTCACAGCACCCGTC
GAGGGTTCGAATCCCTCAGACCCTAtct
Downstream region at tRNA end position 
gaatgaaaaa
Secondary structure (Cloverleaf model)
>W1610014115	Pseudo	TAA
                   c      Atct gaatgaaaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G   A
                     C - G
                     T - A          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G C C T       G A G G G     C
  G           | | |                 T T
  G         A G G A
    C C G A        G     TCACAGCACCCGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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