The detailed information of tRNA gene sequence


Sequence ID>W1610014156
Genome IDAOLQ01000069
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula vallismortis ATCC 29715 [AOLQ]
Start position on genome 292621
End posion on genome 292697
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgaatgcgtc
tRNA gene sequence 
GGGCCAATAGCTCAATCAGGTTGAGCGCTCGGCTGATAACCGGGAGGTTCGCGGTTCAAA
TCCGCGTTGGCCCACTA
Downstream region at tRNA end position 
ttctcgtcgc
Secondary structure (Cloverleaf model)
>W1610014156	Ile	GAT
                   c      ACTA ttctcgtcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G C G C C     A
      T A A        A      | | | | |     A
    C       C T C G       C G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGTT
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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