The detailed information of tRNA gene sequence


Sequence ID>W1610014211
Genome IDAOLS01000032
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula californiae ATCC 33799 [AOLS]
Start position on genome 7959
End posion on genome 8037
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
acgaggaagT
tRNA gene sequence 
AGCGGGATGGGATAGCCAGGAGATTCCGGCGGGCTCATAACCCGCAGATCGGTAGTTCAA
ATCTACCTCCCGCTATCA
Downstream region at tRNA end position 
ttttgccgaa
Secondary structure (Cloverleaf model)
>W1610014211	Pseudo	CAT
                   T      ATCA ttttgccgaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A T C     A
    C C G A        G      | | | | |     A
  A         T A G G       G G T A G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGATC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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