The detailed information of tRNA gene sequence


Sequence ID>W1610014231
Genome IDAOLS01000062
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula californiae ATCC 33799 [AOLS]
Start position on genome 122696
End posion on genome 122622
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccattctgaa
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTTAAAGCGATCGGCTCATAACCGATTGAGCGCTGGTTCAA
ATCCGGCAGGGCCCAttt
Downstream region at tRNA end position 
ctgctgtctc
Secondary structure (Cloverleaf model)
>W1610014231	Met	CAT
                   a      Attt ctgctgtctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C G G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       G C T G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     TGAGC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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