The detailed information of tRNA gene sequence


Sequence ID>W1610014295
Genome IDAOLW01000050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula amylolytica JCM 13557 [AOLW]
Start position on genome 26480
End posion on genome 26391
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgacccattT
tRNA gene sequence 
GCCGCGATGGTCTAGCCTGGTCGGACGCCTCCCTGCTACGGAGGTATCCTGCAAGGGATT
CCCCGGTTCAAATCCGGGTCGCGGCGTCC
Downstream region at tRNA end position 
gcgcgagcgg
Secondary structure (Cloverleaf model)
>W1610014295	Ser	GCT
                   T      GTCC gcgcgagcgg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     G G G C C     A
      C G A        G      | | | | |     A
    C       T C T G       C C C G G     C
    T       + | | |                 T T
    G       G G A C
      G T C        G     TATCCTGCAAGGGATTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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