The detailed information of tRNA gene sequence


Sequence ID>W1610014533
Genome IDAOMC01000043
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus morrhuae DSM 1307 [AOMC]
Start position on genome 964
End posion on genome 880
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgtggctgC
tRNA gene sequence 
GGTGGGGTGGCAGAGTGGACGATTGCGCCTGTCTTGAAAACAGGTGGCCTATGGCCTCAT
GGGTTCGAATCCCATCCCCACCGTtt
Downstream region at tRNA end position 
ccgagcgaac
Secondary structure (Cloverleaf model)
>W1610014533	Ser	TGA
                   C      GTtt ccgagcgaac
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A T G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGGCCTATGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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