The detailed information of tRNA gene sequence


Sequence ID>W1610016184
Genome IDAOSH01000079
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-539-C06 [AOSH]
Start position on genome 1550
End posion on genome 1466
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cttttcttgc
tRNA gene sequence 
GCAGGGGTAGCCAAGCCAGGTCAAAGGCGATAGACTCAAGATCTATTCCTGTAGAGGTTC
GAGCGTTCGAATCGCTCCCCCTGCAtct
Downstream region at tRNA end position 
tttatcttcc
Secondary structure (Cloverleaf model)
>W1610016184	Leu	CAA
                   c      Atct tttatcttcc
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C G C     A
    C C G A        A      | | | | |     G
  A         A C C G       G A G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCTGTAGAGGTTC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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