The detailed information of tRNA gene sequence


Sequence ID>W1610016185
Genome IDAOSH01000098
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-539-C06 [AOSH]
Start position on genome 12695
End posion on genome 12767
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tggttgatac
tRNA gene sequence 
GCCGACATAGCTCAGCTGGTGGAGCGGCTGACTTGTAATCAGCAGGTCGGGGGTTCAAAT
CCCTCTGTCGGCTtaa
Downstream region at tRNA end position 
ttatgcgagt
Secondary structure (Cloverleaf model)
>W1610016185	Thr	TGT
                   c      Ttaa ttatgcgagt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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