The detailed information of tRNA gene sequence


Sequence ID>W1610018774
Genome IDAQVM01000001
Search identical group
Phylum/ClassUnclassified
SpeciesMarine Group II euryarchaeote SCGC AB-629-J06 [AQVM]
Start position on genome 70943
End posion on genome 71032
Amino Acid Pseudo
Anticodon CAA
Upstream region at tRNA start position 
ataacatatT
tRNA gene sequence 
GCCTATTTCCCGTAGTCTGGCCGATCGGGTCGGGTTCAAGACCTGATGAGCGAAAGCTCC
GCCTGGGTTCAACTCCCAGAGTAGGCAACt
Downstream region at tRNA end position 
aataaatttt
Secondary structure (Cloverleaf model)
>W1610018774	Pseudo	CAA
                   T      AACt aataaatttt
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     T + G
                     T - A          T C
                    T     G A C C C     A
    C T G A        C      | | | | |     A
  T         T G C C       C T G G G     C
  G           | | |                 T T
  G         T C G G
    C C G A        G     TGAGCGAAAGCTCCGC
                    T - A
                    C - G
                    G + T
                    G - C
                    G - C
                  T       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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