The detailed information of tRNA gene sequence


Sequence ID>W1610018931
Genome IDAQYM01000031
Search identical group
Phylum/ClassThermoproteota
SpeciesCrenarchaeota archaeon SCGC AAA471-B05 [AQYM]
Start position on genome 105234
End posion on genome 105309
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtaattagaT
tRNA gene sequence 
GCCCTGGTAGTTTAGCCCGGTTAGAATGTGAGGCTGTCACCCTTGAGGCCCGGGTTCAAA
TCCCGGCCAGGGCGTtc
Downstream region at tRNA end position 
attattttat
Secondary structure (Cloverleaf model)
>W1610018931	Asp	GTC
                   T      GTtc attattttat
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T T T G       C C G G G     C
  G         + | | +                 T T
  G         G A A T
    T T A          G     AGGC
                    T + G
                    G + T
                    A - T
                    G - C
                    G - C
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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