The detailed information of tRNA gene sequence


Sequence ID>W1610019066
Genome IDARPW01000453
Search identical group
Phylum/ClassEuryarchaeota
Specieshalophilic archaeon J07HX5 [ARPW]
Start position on genome 2927
End posion on genome 2856
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cagggctgcc
tRNA gene sequence 
GGGCCCATAGCTCAGTGGCAGAGTGCCGCCTTTGCAAGGCGGAGGCCTTGGGTTCAAATC
CCAATGGGTCCAtcc
Downstream region at tRNA end position 
cgtcccgtat
Secondary structure (Cloverleaf model)
>W1610019066	Ala	TGC
                   c      Atcc cgtcccgtat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     A A C C C     A
        G A        A      | | | | |     A
      T     C T C G       T T G G G     C
      G     | | | +                 T T
      G     G A G T
        C A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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