The detailed information of tRNA gene sequence


Sequence ID>W1610019159
Genome IDARPZ01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum sp. J07HQX50 [ARPZ]
Start position on genome 19743
End posion on genome 19820
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agttgtatgT
tRNA gene sequence 
GGGCCCTTAGCTCAGTCTGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCGATGGTTCGA
ATCCGTCAGGGCCCAGCt
Downstream region at tRNA end position 
attcacacct
Secondary structure (Cloverleaf model)
>W1610019159	Met	CAT
                   T      AGCt attcacacct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T G C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G A T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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