The detailed information of tRNA gene sequence


Sequence ID>W1610019180
Genome IDARPZ01000202
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum sp. J07HQX50 [ARPZ]
Start position on genome 2231
End posion on genome 2155
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgtctatgT
tRNA gene sequence 
GGGCTGCTGGTCTAGTCCGGTTATGACAGCTCCTTCACACGGAGCAGGTCGATGGTTCAA
ATCCATCGCAGCCCAGtg
Downstream region at tRNA end position 
cagtttgcct
Secondary structure (Cloverleaf model)
>W1610019180	Val	CAC
                   T      AGtg cagtttgcct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  C         T C T G       G A T G G     C
  G           | | |                 T T
  G         T G A C
    T T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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