The detailed information of tRNA gene sequence


Sequence ID>W1610020512
Genome IDASMO01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Aenigmarchaeota archaeon JGI 0000106-F11 [ASMO]
Start position on genome 3489
End posion on genome 3416
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atagcaagag
tRNA gene sequence 
GGGGTAGTAGTATAACTTGGCTAGTATTCCAGCTTCGGGAGCTGGCGATCTGGGTTCAAA
TCCCAGCTACCCCAttt
Downstream region at tRNA end position 
ttaaaaattt
Secondary structure (Cloverleaf model)
>W1610020512	Pro	CGG
                   g      Attt ttaaaaattt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     G A C C C     A
    T C A A        A      | | | | |     A
  T         T A T G       C T G G G     C
  G         + | | +                 T T
  G         G T A T
    C T A          T     CGAT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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