The detailed information of tRNA gene sequence


Sequence ID>W1610020523
Genome IDASMP01000001
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon SCGC AAA011-D5 [ASMP]
Start position on genome 258358
End posion on genome 258275
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attttcatcT
tRNA gene sequence 
GCCCGGATGGCAGAGTGGTTATTGCACGCGGCTCGAACCCGCGGTCCTCGCGGACATCTA
GGTTCAATTCCTAGTCCGGGCGTtt
Downstream region at tRNA end position 
gcttttaatt
Secondary structure (Cloverleaf model)
>W1610020523	Ser	CGA
                   T      GTtt gcttttaatt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     G A T C C     A
      T G A        G      | | | | |     A
    G       G A C G       C T A G G     C
    G       + | | |                 T T
    T       T T G C
      T A          A     GTCCTCGCGGACAT
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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