The detailed information of tRNA gene sequence


Sequence ID>W1610020527
Genome IDASMP01000001
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon SCGC AAA011-D5 [ASMP]
Start position on genome 47330
End posion on genome 47257
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttagtttT
tRNA gene sequence 
GGCTACATAGTTCAGCGGCAGAACACTAGTCTCATGAGCTAGGGGTCCCAGGTTCAACTC
CTGGTGTAGCCATtt
Downstream region at tRNA end position 
tttaataaat
Secondary structure (Cloverleaf model)
>W1610020527	Met	CAT
                   T      ATtt tttaataaat
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     A - T          T C
                    T     G G T C C     A
        G A        A      | | | | |     A
      C     C T T G       C C A G G     C
      G     | | | |                 T T
      G     G A A C
        C A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T + G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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