The detailed information of tRNA gene sequence


Sequence ID>W1610020578
Genome IDASPF01000004
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 51066
End posion on genome 50992
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taaaggtaag
tRNA gene sequence 
GGGCCGGTAGATCAGTGGGAGATCGCCCGCCTTGCACGCGGGAGGTCGCGGGTTCAAATC
CCGCCCGGTCCACTA
Downstream region at tRNA end position 
tatcaaattt
Secondary structure (Cloverleaf model)
>W1610020578	Ala	TGC
                   g      ACTA tatcaaattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      T     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        G A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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