The detailed information of tRNA gene sequence


Sequence ID>W1610020579
Genome IDASPF01000006
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 52986
End posion on genome 52911
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagggataaa
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGGCTAACCCGCCGGGCTCATAACCCGGAGAACGCTGGTTCA
AATCCAGCCCCCGCTAact
Downstream region at tRNA end position 
ttatacatta
Secondary structure (Cloverleaf model)
>W1610020579	Met	CAT
                   a      Aact ttatacatta
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G C T G G     C
  G         | | | |                 T T
  G         A C C C
    G C T A        G     AGAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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