The detailed information of tRNA gene sequence


Sequence ID>W1610020581
Genome IDASPF01000013
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 36946
End posion on genome 37019
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctagaaggta
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTAGAGCAGCGGGCTCATAACCCGTTGGTCGTGGGTTCGAA
TCCCACCGGGCCCAtgc
Downstream region at tRNA end position 
aattctactt
Secondary structure (Cloverleaf model)
>W1610020581	Met	CAT
                   a      Atgc aattctactt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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