The detailed information of tRNA gene sequence


Sequence ID>W1610020582
Genome IDASPF01000013
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 64791
End posion on genome 64718
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atagatctac
tRNA gene sequence 
GCCCGGGTGGCCGAGTGGTTTAGGCGGCGGGCTGCAGACCCGCTCTACGGGGGTTCAAAT
CCCTCCCCGGGCTCat
Downstream region at tRNA end position 
caagatttta
Secondary structure (Cloverleaf model)
>W1610020582	Cys	GCA
                   c      TCat caagatttta
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T          G     TCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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